
MDAnalysis
The industry-standard Python library for high-performance molecular dynamics trajectory analysis.
Brian is a free, open source simulator for spiking neural networks designed for ease of use, flexibility, and extensibility.

Brian 2 is a Python-based, open-source simulator designed for spiking neural networks. It allows users to define, run, and plot neural models using a straightforward syntax. Brian 2 leverages runtime code generation, automatically converting equations into low-level C++ code for efficient simulations. This simulator supports detailed biophysical models like Hodgkin-Huxley, as well as simplified models such as leaky integrate-and-fire neurons, offering the flexibility to implement custom synapse models. Brian 2 has been used in numerous modeling studies and is integrated into the computational neuroscience textbook 'Neuronal Dynamics'. It caters to researchers and students who require a reliable, accurate, and customizable tool for neural network simulations.
Brian 2 is a Python-based, open-source simulator designed for spiking neural networks.
Explore all tools that specialize in define neuron equations. This domain focus ensures Brian 2 delivers optimized results for this specific requirement.
Explore all tools that specialize in run simulation with custom parameters. This domain focus ensures Brian 2 delivers optimized results for this specific requirement.
Explore all tools that specialize in plot simulation results. This domain focus ensures Brian 2 delivers optimized results for this specific requirement.
Automatically converts high-level model descriptions into optimized C++ code, improving simulation speed.
Detects and reports dimensionally inconsistent equations, preventing errors in model definitions.
Allows users to define neuron and synapse models using mathematical equations, including differential equations.
Designed to be easily extended with new features, models, and simulation methods.
Integrates physical units into the simulation, ensuring dimensional correctness and simplifying parameter management.
Install Python on your system (if not already installed).
Install Brian 2 using conda: `conda install -c conda-forge brian2` or pip: `pip install brian2`.
Consult the Beginners Guide on the Brian 2 website.
Work through the Tutorials provided in the documentation.
Explore the Examples to understand different modeling approaches.
Refer to the detailed Documentation for specific functionalities and advanced usage.
Join the Community Forum for support and discussions.
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The industry-standard Python library for high-performance molecular dynamics trajectory analysis.

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