Overview
WikiPathways is a collaboratively edited, open science platform dedicated to curating biological pathways. Researchers can contribute to, update, and utilize the pathway information available. The platform enables exploration of pathways by organism, community, and ontology annotations. Users can analyze and visualize data in the context of pathway diagrams, and download pathway information in various formats, including GPML, GMT, and SVG. It provides programmatic access via API, Linked Data, SPARQL, R, and Python. WikiPathways serves as a valuable resource for researchers in systems biology, bioinformatics, and related fields by fostering knowledge sharing and facilitating pathway-based data analysis.
Common tasks