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Home/Tasks/WikiPathways
WikiPathways logo

WikiPathways

WikiPathways is an open science platform for biological pathways contributed, updated, and used by the research community.

Science & HealthcareAPI available
Good for
Browse biological pathwaysContribute to pathway curation
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About WikiPathways

WikiPathways is a collaboratively edited, open science platform dedicated to curating biological pathways. Researchers can contribute to, update, and utilize the pathway information available. The platform enables exploration of pathways by organism, community, and ontology annotations. Users can analyze and visualize data in the context of pathway diagrams, and download pathway information in various formats, including GPML, GMT, and SVG. It provides programmatic access via API, Linked Data, SPARQL, R, and Python. WikiPathways serves as a valuable resource for researchers in systems biology, bioinformatics, and related fields by fostering knowledge sharing and facilitating pathway-based data analysis.

Core Capabilities

WikiPathways is a collaboratively edited, open science platform dedicated to curating biological pathways.

Main Tasks

Browse biological pathways

Explore all tools that specialize in browse biological pathways. This domain focus ensures WikiPathways delivers optimized results for this specific requirement.

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Contribute to pathway curation

Explore all tools that specialize in contribute to pathway curation. This domain focus ensures WikiPathways delivers optimized results for this specific requirement.

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Download pathway data in various formats (GPML, GMT, SVG)

Explore all tools that specialize in download pathway data in various formats (gpml, gmt, svg). This domain focus ensures WikiPathways delivers optimized results for this specific requirement.

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Analyze experimental data in the context of pathways

Explore all tools that specialize in analyze experimental data in the context of pathways. This domain focus ensures WikiPathways delivers optimized results for this specific requirement.

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Visualize pathway diagrams

Explore all tools that specialize in visualize pathway diagrams. This domain focus ensures WikiPathways delivers optimized results for this specific requirement.

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Access pathway data programmatically via API

Explore all tools that specialize in access pathway data programmatically via api. This domain focus ensures WikiPathways delivers optimized results for this specific requirement.

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Decision Summary

What this tool is best suited for

Best Fit
Open Science ResourceBioinformatics
Buying Signals
Pricing not specified
API available
Web-first workflow
Setup And Compliance
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No onboarding steps listed
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Core Tasks

  • Browse biological pathways
  • Contribute to pathway curation
  • Download pathway data in various formats (GPML, GMT, SVG)
  • Analyze experimental data in the context of pathways
  • Visualize pathway diagrams
  • Access pathway data programmatically via API

Target Personas

Open Science ResourceBioinformatics

Categories

Healthcare & MedicalResearch & Academia

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